PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_2.298
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family bZIP
Protein Properties Length: 404aa    MW: 43000.1 Da    PI: 7.0049
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_2.298genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.38.9e-10205261561
                                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                                  kr++r   NR +A rs +RK  +i eLe+kv++L++e ++L  +l   +     l s
  evm.model.supercontig_2.298 205 KRAKRILANRQSAARSKERKARYILELERKVQTLQTEATTLSAQLTLFQRDTTGLSS 261
                                  9****************************************9998877666655555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-15201265IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.611203266IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.09E-10205256No hitNo description
PfamPF001701.2E-8205262IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.6E-8205260No hitNo description
CDDcd147039.72E-24206255No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
MSMEIQDPEF KPKPNPNSSP NISPLPNAAT SSFSSGPTSL LHAPALLRGG PHHRRAHSEV  60
SFRMPDDMSM MMTDLSPPPG PISGGGAAAA GGGGGSSTAS FEEIGSEDDV FSTYIDVDKL  120
AGGSIGSGDC AAGRNCTDHT AAAGGGGDKM PTSSTSNTTS LSRPRHRHSN SMDGGSSMYG  180
GAEIMEAKKA MPPDKLAELW NLDPKRAKRI LANRQSAARS KERKARYILE LERKVQTLQT  240
EATTLSAQLT LFQRDTTGLS SENTELKLRL QAMEQQAQLR DALNEALKKE VERLKIATGE  300
MMSPSESFNL GMHHMQYVPS AFLPIPQQLG PASHPNMQLP PFSHSQASMP SHHLHHANSH  360
HISELLQNDP LGRLQGLDIG SKGSSLMKSE GPSLSASESS STY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP2296784e-43KP229678.1 UNVERIFIED: Boehmeria nivea Basic leucine zipper transcription factor-like (bZIP12) mRNA, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007017082.11e-177Basic-leucine zipper transcription factor family protein
SwissprotQ6S4P41e-106RF2B_ORYSJ; Transcription factor RF2b
TrEMBLA0A061GYW11e-177A0A061GYW1_THECC; Basic-leucine zipper transcription factor family protein
STRINGPOPTR_0013s15280.11e-163(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM40422757
Representative plantOGRP12617181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40620.14e-94bZIP family protein